Draft genome sequence of Fusicladium effusum, cause of pecan scab
نویسندگان
چکیده
Pecan scab, caused by the plant pathogenic fungus Fusicladium effusum, is the most destructive disease of pecan, an important specialty crop cultivated in several regions of the world. Only a few members of the family Venturiaceae (in which the pathogen resides) have been reported sequenced. We report the first draft genome sequence (40.6 Mb) of an isolate F. effusum collected from a pecan tree (cv. Desirable) in central Georgia, in the US. The genome sequence described will be a useful resource for research of the biology and ecology of the pathogen, coevolution with the pecan host, characterization of genes of interest, and development of markers for studies of genetic diversity, genotyping and phylogenetic analysis. The annotation of the genome is described and a phylogenetic analysis is presented.
منابع مشابه
Biology and Epidemiology of Venturia Species Affecting Fruit Crops: A Review
The fungal genus Venturia Sacc. (anamorph Fusicladium Bonord.) includes plant pathogens that cause substantial economic damage to fruit crops worldwide. Although Venturia inaequalis is considered a model species in plant pathology, other Venturia spp. also cause scab on other fruit trees. Relative to the substantial research that has been conducted on V. inaequalis and apple scab, little resear...
متن کاملDraft Genome Sequence of Rhizobium sp. GHKF11, Isolated from Farmland Soil in Pecan Grove, Texas
Rhizobium sp. GHKF11 is an organophosphate-degrading bacterial strain that was isolated from farmland soil in Pecan Grove, Texas, USA. In addition to a capacity for pesticide degradation, GHKF11 shares conserved traits with other Rhizobium spp., including heavy metal resistance and transport genes that may have significant agricultural biotechnology applications.
متن کاملA preliminary study on the genus Fusicladium s. l. in Iran
During 2011, twigs, leaves and fruits of symptomatic hosts containing Fusicladium species from Guilan, Mazandaran, Qazvin and Ardabil provinces were sampled and examined. Five species including F. carpophilum, F. fraxini, F. oleagineum, F. pomi and F. pyrorum were identified based on morphological data. Of these, F. carpophilum and F. fraxini are identified as new records for the mycobiota of I...
متن کاملDraft Genome Sequence of Endocarpon pusillum Strain KoLRILF000583
Lichen Endocarpon pusillum is a highly desiccation-tolerant and dominant species in biological soil crusts in arid and semi-arid regions. We report the draft genome sequence of a lichen-forming fungus, E. pusillum strain KoLRILF000583. The draft genome assembly has a size of 37,173,200 bp with a GC content of 49.71%, consisting of 40 scaffolds.
متن کاملDetection and Characterization of Weissellicin 110, a Bacteriocin Produced by Weissella cibaria
Background: Weissellicin 110 is the only bacteriocin reported in Weissella cibaria up to now. This bacteriocin represents several unique features. This is the first report on the gene sequence that encodes for the bacteriocin. Objectives: Providing a rapid detection method to isolate the weissellicin 110 encoding gene and determination of the bacteriocin distribution were the objectives. Materi...
متن کامل